{
"_id": "6a156b6cacfb0bcc41d639d7",
"Package": "dbGaPCheckup",
"Type": "Package",
"Title": "dbGaP Checkup",
"Version": "1.2.0",
"Authors@R": "c(person(c(\"Lacey\", \"W.\"), \"Heinsberg\", email = \"law145@pitt.edu\", role = c(\"aut\", \"cre\")), \nperson(c(\"Daniel\",\"E.\"), \"Weeks\", email = \"weeks@pitt.edu\", role = c(\"aut\")),\nperson(\"\",\"University of Pittsburgh\",role=c(\"cph\")))",
"URL": "https://lwheinsberg.github.io/dbGaPCheckup/,\nhttps://github.com/lwheinsberg/dbGaPCheckup",
"Description": "Contains functions that check for formatting of the\nSubject Phenotype data set and data dictionary as specified by\nthe National Center for Biotechnology Information (NCBI)\nDatabase of Genotypes and Phenotypes (dbGaP)\n.",
"Encoding": "UTF-8",
"LazyData": "true",
"License": "GPL-2",
"Roxygen": "list(markdown = TRUE)",
"RoxygenNote": "7.3.2",
"VignetteBuilder": "knitr, rmarkdown, formatR",
"Config/pak/sysreqs": "cmake make libicu-dev libuv1-dev libx11-dev\nzlib1g-dev",
"Repository": "https://lwheinsberg.r-universe.dev",
"Date/Publication": "2025-05-01 14:30:05 UTC",
"RemoteUrl": "https://github.com/lwheinsberg/dbgapcheckup",
"RemoteRef": "HEAD",
"RemoteSha": "984c24fef8c46df121e5df2ca761f6b845fa167b",
"NeedsCompilation": "no",
"Packaged": {
"Date": "2026-05-26 09:40:20 UTC",
"User": "root"
},
"Author": "Lacey W. Heinsberg [aut, cre],\nDaniel E. Weeks [aut],\nUniversity of Pittsburgh [cph]",
"Maintainer": "Lacey W. Heinsberg ",
"MD5sum": "6feac7a8c2fb8957493810b096409983",
"_user": "lwheinsberg",
"_type": "src",
"_file": "dbGaPCheckup_1.2.0.tar.gz",
"_fileid": "cf67ad5653673689993920eecd2dffb8fd57852e86e45378c56dc736e779a533",
"_filesize": 1166465,
"_sha256": "cf67ad5653673689993920eecd2dffb8fd57852e86e45378c56dc736e779a533",
"_created": "2026-05-26T09:40:20.000Z",
"_published": "2026-05-26T09:44:12.011Z",
"_distro": "noble",
"_jobs": [
{
"job": 77847791039,
"time": 169,
"config": "linux-devel-x86_64",
"r": "4.7.0",
"check": "OK",
"artifact": "7213819093"
},
{
"job": 77847791060,
"time": 191,
"config": "linux-release-x86_64",
"r": "4.6.0",
"check": "OK",
"artifact": "7213826062"
},
{
"job": 77847791032,
"time": 150,
"config": "macos-oldrel-arm64",
"r": "4.5.3",
"check": "OK",
"artifact": "7213806190"
},
{
"job": 77847790996,
"time": 142,
"config": "macos-release-arm64",
"r": "4.6.0",
"check": "OK",
"artifact": "7213803428"
},
{
"job": 77847132071,
"time": 241,
"config": "source",
"r": "4.6.0",
"check": "OK",
"artifact": "7213760922"
},
{
"job": 77847791015,
"time": 135,
"config": "wasm-release",
"r": "4.6.0",
"check": "OK",
"artifact": "7213807911"
},
{
"job": 77847791006,
"time": 128,
"config": "windows-devel",
"r": "4.7.0",
"check": "OK",
"artifact": "7213805374"
},
{
"job": 77847791163,
"time": 121,
"config": "windows-oldrel",
"r": "4.5.3",
"check": "OK",
"artifact": "7213803779"
},
{
"job": 77847791112,
"time": 113,
"config": "windows-release",
"r": "4.6.0",
"check": "OK",
"artifact": "7213800589"
}
],
"_buildurl": "https://github.com/r-universe/lwheinsberg/actions/runs/26444464913",
"_status": "success",
"_host": "GitHub-Actions",
"_upstream": "https://github.com/lwheinsberg/dbgapcheckup",
"_commit": {
"id": "984c24fef8c46df121e5df2ca761f6b845fa167b",
"author": "Lacey W. Heinsberg ",
"committer": "Lacey W. Heinsberg ",
"message": "polishing github io site\n",
"time": 1746109805
},
"_maintainer": {
"name": "Lacey W. Heinsberg",
"email": "law145@pitt.edu",
"login": "lwheinsberg",
"twitter": "@lwheinsberg",
"description": "",
"uuid": 35496805
},
"_registered": true,
"_dependencies": [
{
"package": "R",
"version": ">= 3.5.0",
"role": "Depends"
},
{
"package": "readxl",
"role": "Imports"
},
{
"package": "tidyr",
"role": "Imports"
},
{
"package": "dplyr",
"role": "Imports"
},
{
"package": "formatR",
"role": "Imports"
},
{
"package": "ggplot2",
"role": "Imports"
},
{
"package": "pander",
"role": "Imports"
},
{
"package": "magrittr",
"role": "Imports"
},
{
"package": "rmarkdown",
"role": "Imports"
},
{
"package": "purrr",
"role": "Imports"
},
{
"package": "questionr",
"role": "Imports"
},
{
"package": "tibble",
"role": "Imports"
},
{
"package": "rlang",
"role": "Imports"
},
{
"package": "labelled",
"role": "Imports"
},
{
"package": "stats",
"role": "Imports"
},
{
"package": "utils",
"role": "Imports"
},
{
"package": "graphics",
"role": "Imports"
},
{
"package": "naniar",
"role": "Imports"
},
{
"package": "stringi",
"role": "Imports"
},
{
"package": "stringr",
"role": "Imports"
},
{
"package": "testthat",
"role": "Suggests"
},
{
"package": "knitr",
"role": "Suggests"
}
],
"_owner": "lwheinsberg",
"_selfowned": true,
"_usedby": 0,
"_updates": [],
"_tags": [],
"_stars": 4,
"_contributors": [
{
"user": "lwheinsberg",
"count": 105,
"uuid": 35496805
},
{
"user": "danieleweeks",
"count": 8,
"uuid": 8495972
}
],
"_userbio": {
"uuid": 35496805,
"type": "user",
"name": "Lacey W. Heinsberg"
},
"_downloads": {
"count": 714,
"source": "https://cranlogs.r-pkg.org/downloads/total/last-month/dbGaPCheckup"
},
"_devurl": "https://github.com/lwheinsberg/dbgapcheckup",
"_pkgdown": "https://lwheinsberg.github.io/dbGaPCheckup/",
"_searchresults": 21,
"_rbuild": "4.6.0",
"_assets": [
"extra/citation.cff",
"extra/citation.html",
"extra/citation.json",
"extra/citation.txt",
"extra/contents.json",
"extra/dbGaPCheckup.html",
"extra/NEWS.html",
"extra/NEWS.txt",
"extra/readme.html",
"extra/readme.md",
"manual.pdf"
],
"_homeurl": "https://github.com/lwheinsberg/dbgapcheckup",
"_realowner": "lwheinsberg",
"_cranurl": true,
"_releases": [
{
"version": "1.0.0",
"date": "2022-11-14"
},
{
"version": "1.0.1",
"date": "2022-12-22"
},
{
"version": "1.0.2",
"date": "2023-02-22"
},
{
"version": "1.1.0",
"date": "2023-09-27"
}
],
"_exports": [
"add_missing_fields",
"ascii_check",
"ascii_cleaner",
"check_report",
"complete_check",
"create_awareness_report",
"create_report",
"dat_function",
"dat_function_selected",
"decimal_check",
"description_check",
"dictionary_search",
"dimension_check",
"dup_values",
"duplicated_id_check",
"eval_function",
"field_check",
"id_check",
"id_first_data",
"id_first_dict",
"int_check",
"integer_check",
"label_data",
"minmax_check",
"misc_format_check",
"missing_value_check",
"missingness_summary",
"mm_precheck",
"mv_precheck",
"NA_check",
"NA_precheck",
"name_check",
"name_correct",
"name_precheck",
"pkg_field_check",
"reorder_data",
"reorder_dictionary",
"row_check",
"short_field_check",
"short_precheck",
"super_short_precheck",
"type_check",
"value_meaning_table",
"value_missing_table",
"values_check",
"values_precheck"
],
"_datasets": [
{
"name": "DD.dict.A",
"title": "DD.dict.A",
"object": "ExampleA",
"class": [
"tbl_df",
"tbl",
"data.frame"
],
"fields": [
"VARNAME",
"VARDESC",
"DOCFILE",
"TYPE",
"UNITS",
"MIN",
"MAX",
"RESOLUTION",
"COMMENT1",
"COMMENT2",
"VARIABLE_SOURCE",
"SOURCE_VARIABLE_ID",
"VARIABLE_MAPPING",
"UNIQUEKEY",
"COLLINTERVAL",
"ORDER",
"VALUES",
"...18",
"...19",
"...20",
"...21",
"...22"
],
"rows": 30,
"table": true,
"tojson": true
},
{
"name": "DD.dict.B",
"title": "DD.dict.B",
"object": "ExampleB",
"class": [
"tbl_df",
"tbl",
"data.frame"
],
"fields": [
"VARNAME",
"VARDESC",
"DOCFILE",
"TYPE",
"UNITS",
"MIN",
"MAX",
"RESOLUTION",
"COMMENT1",
"COMMENT2",
"VARIABLE_SOURCE",
"SOURCE_VARIABLE_ID",
"VARIABLE_MAPPING",
"UNIQUEKEY",
"COLLINTERVAL",
"ORDER",
"VALUES",
"...18",
"...19",
"...20",
"...21"
],
"rows": 29,
"table": true,
"tojson": true
},
{
"name": "DD.dict.C",
"title": "DD.dict.C",
"object": "ExampleC",
"class": [
"tbl_df",
"tbl",
"data.frame"
],
"fields": [
"VARNAME",
"VARDESC",
"DOCFILE",
"TYPE",
"UNITS",
"MIN",
"MAX",
"RESOLUTION",
"COMMENT1",
"COMMENT2",
"VARIABLE_SOURCE",
"SOURCE_VARIABLE_ID",
"VARIABLE_MAPPING",
"UNIQUEKEY",
"COLLINTERVAL",
"ORDER",
"VALUES",
"...18",
"...19",
"...20",
"...21",
"...22"
],
"rows": 29,
"table": true,
"tojson": true
},
{
"name": "DD.dict.D",
"title": "DD.dict.D",
"object": "ExampleD",
"class": [
"tbl_df",
"tbl",
"data.frame"
],
"fields": [
"VARNAME",
"VARDESC",
"DOCFILE",
"UNITS",
"RESOLUTION",
"COMMENT1",
"COMMENT2",
"VARIABLE_SOURCE",
"SOURCE_VARIABLE_ID",
"VARIABLE_MAPPING",
"UNIQUEKEY",
"COLLINTERVAL",
"ORDER",
"VALUES",
"...15",
"...16",
"...17",
"...18",
"...19"
],
"rows": 30,
"table": true,
"tojson": true
},
{
"name": "DD.dict.E",
"title": "DD.dict.E",
"object": "ExampleE",
"class": [
"tbl_df",
"tbl",
"data.frame"
],
"fields": [
"VARNAME",
"VARDESC",
"DOCFILE",
"TYPE",
"UNITS",
"MIN",
"MAX",
"RESOLUTION",
"COMMENT1",
"COMMENT2",
"VARIABLE_SOURCE",
"SOURCE_VARIABLE_ID",
"VARIABLE_MAPPING",
"UNIQUEKEY",
"COLLINTERVAL",
"ORDER",
"VALUES",
"VALUES2",
"VALUES3",
"VALUES4",
"VALUES5",
"VALUES6"
],
"rows": 30,
"table": true,
"tojson": true
},
{
"name": "DD.dict.F",
"title": "DD.dict.F",
"object": "ExampleF",
"class": [
"tbl_df",
"tbl",
"data.frame"
],
"fields": [
"VARNAME",
"VARDESC",
"DOCFILE",
"TYPE",
"UNITS",
"MIN",
"MAX",
"RESOLUTION",
"COMMENT1",
"COMMENT2",
"VARIABLE_SOURCE",
"SOURCE_VARIABLE_ID",
"VARIABLE_MAPPING",
"UNIQUEKEY",
"COLLINTERVAL",
"ORDER",
"VALUES",
"...18",
"...19",
"...20",
"...21"
],
"rows": 30,
"table": true,
"tojson": true
},
{
"name": "DD.dict.G",
"title": "DD.dict.G",
"object": "ExampleG",
"class": [
"tbl_df",
"tbl",
"data.frame"
],
"fields": [
"VARNAME",
"VARDESC",
"DOCFILE",
"TYPE",
"UNITS",
"MIN",
"MAX",
"RESOLUTION",
"COMMENT1",
"COMMENT2",
"VARIABLE_SOURCE",
"SOURCE_VARIABLE_ID",
"VARIABLE_MAPPING",
"UNIQUEKEY",
"COLLINTERVAL",
"ORDER",
"VALUES1",
"VALUES2",
"VALUES3",
"VALUES4",
"VALUES5",
"VALUES6"
],
"rows": 31,
"table": true,
"tojson": true
},
{
"name": "DD.dict.H",
"title": "DD.dict.H",
"object": "ExampleH",
"class": [
"tbl_df",
"tbl",
"data.frame"
],
"fields": [
"VARNAME",
"VARDESC",
"DOCFILE",
"TYPE",
"UNITS",
"MIN",
"MAX",
"RESOLUTION",
"COMMENT1",
"COMMENT2",
"VARIABLE_SOURCE",
"SOURCE_VARIABLE_ID",
"VARIABLE_MAPPING",
"UNIQUEKEY",
"COLLINTERVAL",
"ORDER",
"VALUES",
"...18",
"...19",
"...20",
"...21",
"...22"
],
"rows": 30,
"table": true,
"tojson": true
},
{
"name": "DD.dict.I",
"title": "DD.dict.I",
"object": "ExampleI",
"class": [
"tbl_df",
"tbl",
"data.frame"
],
"fields": [
"VARNAME",
"VARDESC",
"DOCFILE",
"TYPE",
"UNITS",
"MIN",
"MAX",
"RESOLUTION",
"COMMENT1",
"COMMENT2",
"VARIABLE_SOURCE",
"SOURCE_VARIABLE_ID",
"VARIABLE_MAPPING",
"UNIQUEKEY",
"COLLINTERVAL",
"ORDER",
"VALUES",
"...18",
"...19",
"...20",
"...21",
"...22"
],
"rows": 30,
"table": true,
"tojson": true
},
{
"name": "DD.dict.J",
"title": "DD.dict.J",
"object": "ExampleJ",
"class": [
"tbl_df",
"tbl",
"data.frame"
],
"fields": [
"VARNAME",
"VARDESC",
"DOCFILE",
"TYPE",
"UNITS",
"MIN",
"MAX",
"RESOLUTION",
"COMMENT1",
"COMMENT2",
"VARIABLE_SOURCE",
"SOURCE_VARIABLE_ID",
"VARIABLE_MAPPING",
"UNIQUEKEY",
"COLLINTERVAL",
"ORDER",
"VALUES",
"...18",
"...19",
"...20",
"...21",
"...22"
],
"rows": 29,
"table": true,
"tojson": true
},
{
"name": "DD.dict.K",
"title": "DD.dict.K",
"object": "ExampleK",
"class": [
"tbl_df",
"tbl",
"data.frame"
],
"fields": [
"VARNAME",
"VARDESC",
"DOCFILE",
"TYPE",
"UNITS",
"MIN",
"MAX",
"RESOLUTION",
"COMMENT1",
"COMMENT2",
"VARIABLE_SOURCE",
"SOURCE_VARIABLE_ID",
"VARIABLE_MAPPING",
"UNIQUEKEY",
"COLLINTERVAL",
"ORDER",
"VALUES",
"...18",
"...19",
"...20",
"...21",
"...22"
],
"rows": 29,
"table": true,
"tojson": true
},
{
"name": "DD.dict.L",
"title": "DD.dict.L",
"object": "ExampleL",
"class": [
"tbl_df",
"tbl",
"data.frame"
],
"fields": [
"VARNAME",
"VARDESC",
"DOCFILE",
"TYPE",
"UNITS",
"MIN",
"MAX",
"RESOLUTION",
"COMMENT1",
"COMMENT2",
"VARIABLE_SOURCE",
"SOURCE_VARIABLE_ID",
"VARIABLE_MAPPING",
"UNIQUEKEY",
"COLLINTERVAL",
"ORDER",
"VALUES",
"VALUES2",
"VALUES3",
"VALUES4",
"VALUES5",
"VALUES6"
],
"rows": 30,
"table": true,
"tojson": true
},
{
"name": "DD.dict.M",
"title": "DD.dict.M",
"object": "ExampleM",
"class": [
"tbl_df",
"tbl",
"data.frame"
],
"fields": [
"VARNAME",
"VARDESC",
"DOCFILE",
"TYPE",
"UNITS",
"MIN",
"MAX",
"RESOLUTION",
"COMMENT1",
"COMMENT2",
"VARIABLE_SOURCE",
"SOURCE_VARIABLE_ID",
"VARIABLE_MAPPING",
"UNIQUEKEY",
"COLLINTERVAL",
"ORDER",
"VALUES",
"VALUES2",
"VALUES3",
"VALUES4",
"VALUES5",
"VALUES6"
],
"rows": 30,
"table": true,
"tojson": true
},
{
"name": "DD.dict.N",
"title": "DD.dict.N",
"object": "ExampleN",
"class": [
"tbl_df",
"tbl",
"data.frame"
],
"fields": [
"VARNAME",
"VARDESC",
"DOCFILE",
"TYPE",
"UNITS",
"MIN",
"MAX",
"RESOLUTION",
"COMMENT1",
"COMMENT2",
"VARIABLE_SOURCE",
"SOURCE_VARIABLE_ID",
"VARIABLE_MAPPING",
"UNIQUEKEY",
"COLLINTERVAL",
"ORDER",
"VALUES",
"VALUES2",
"VALUES3",
"VALUES4",
"VALUES5",
"VALUES6"
],
"rows": 30,
"table": true,
"tojson": true
},
{
"name": "DD.dict.Q",
"title": "DD.dict.Q",
"object": "ExampleQ",
"class": [
"tbl_df",
"tbl",
"data.frame"
],
"fields": [
"VARNAME",
"VARDESC",
"DOCFILE",
"TYPE",
"UNITS",
"MIN",
"MAX",
"RESOLUTION",
"COMMENT1",
"COMMENT2",
"VARIABLE_SOURCE",
"SOURCE_VARIABLE_ID",
"VARIABLE_MAPPING",
"UNIQUEKEY",
"COLLINTERVAL",
"ORDER",
"VALUES",
"...18",
"...19",
"...20",
"...21",
"...22"
],
"rows": 30,
"table": true,
"tojson": true
},
{
"name": "DD.dict.R",
"title": "DD.dict.R",
"object": "ExampleR",
"class": [
"tbl_df",
"tbl",
"data.frame"
],
"fields": [
"VARNAME",
"VARDESC",
"DOCFILE",
"TYPE",
"UNITS",
"MIN",
"MAX",
"RESOLUTION",
"COMMENT1",
"COMMENT2",
"VARIABLE_SOURCE",
"SOURCE_VARIABLE_ID",
"VARIABLE_MAPPING",
"UNIQUEKEY",
"COLLINTERVAL",
"ORDER",
"VALUES",
"",
"",
"",
"",
""
],
"rows": 30,
"table": true,
"tojson": true
},
{
"name": "DD.dict.S",
"title": "DD.dict.S",
"object": "ExampleS",
"class": [
"tbl_df",
"tbl",
"data.frame"
],
"fields": [
"VARNAME",
"VARDESC",
"DOCFILE",
"TYPE",
"UNITS",
"MIN",
"MAX",
"RESOLUTION",
"COMMENT1",
"COMMENT2",
"VARIABLE_SOURCE",
"SOURCE_VARIABLE_ID",
"VARIABLE_MAPPING",
"UNIQUEKEY",
"COLLINTERVAL",
"ORDER",
"VALUES",
"...18",
"...19",
"...20",
"...21",
"...22"
],
"rows": 30,
"table": true,
"tojson": true
},
{
"name": "DD.dict.T",
"title": "DD.dict.T",
"object": "ExampleT",
"class": [
"tbl_df",
"tbl",
"data.frame"
],
"fields": [
"VARNAME",
"VARDESC",
"DOCFILE",
"TYPE",
"UNITS",
"MIN",
"MAX",
"RESOLUTION",
"COMMENT1",
"COMMENT2",
"VARIABLE_SOURCE",
"SOURCE_VARIABLE_ID",
"VARIABLE_MAPPING",
"UNIQUEKEY",
"COLLINTERVAL",
"ORDER",
"VALUES",
"...18",
"...19",
"...20",
"...21",
"...22"
],
"rows": 30,
"table": true,
"tojson": true
},
{
"name": "DS.data.A",
"title": "DS.data.A",
"object": "ExampleA",
"class": [
"data.frame"
],
"fields": [
"SUBJECT_ID",
"SAMPLE_ID",
"AGE",
"SEX",
"PREGNANT",
"HEIGHT",
"WEIGHT",
"BMI",
"OBESITY",
"ABD_CIRC",
"HIP_CIRC",
"ABD_SKF",
"SUP_SKF",
"RESIST",
"REACT",
"CUFFSIZE",
"BP_SYSTOLIC",
"BP_DIASTOLIC",
"HTN",
"SMOKING_HX",
"LENGTH_SMOKING_YEARS",
"HEART_RATE",
"PHYSICAL_ACTIVITY",
"HX_DM",
"HX_STROKE",
"HX_ANXIETY",
"HX_DEPRESSION",
"SOCIAL_SUPPORT",
"PERCEIVED_CONFLICT",
"PERCEIVED_HEALTH"
],
"rows": 100,
"table": true,
"tojson": true
},
{
"name": "DS.data.B",
"title": "DS.data.B",
"object": "ExampleB",
"class": [
"data.frame"
],
"fields": [
"SUBJECT_ID",
"SAMPLE_ID",
"AGE",
"SEX",
"HEIGHT",
"WEIGHT",
"BMI",
"OBESITY",
"ABD_CIRC",
"HIP_CIRC",
"ABD_SKF",
"SUP_SKF",
"RESIST",
"REACT",
"CUFFSIZE",
"BP_SYSTOLIC",
"BP_DIASTOLIC",
"HTN",
"SMOKING_HX",
"LENGTH_SMOKING_YEARS",
"HEART_RATE",
"PHYSICAL_ACTIVITY",
"HX_DM",
"HX_STROKE",
"HX_ANXIETY",
"HX_DEPRESSION",
"SOCIAL_SUPPORT",
"PERCEIVED_CONFLICT",
"PERCEIVED_HEALTH"
],
"rows": 100,
"table": true,
"tojson": true
},
{
"name": "DS.data.C",
"title": "DS.data.C",
"object": "ExampleC",
"class": [
"data.frame"
],
"fields": [
"SUBJECT_ID",
"SAMPLE_ID",
"AGE",
"SEX",
"HEIGHT",
"WEIGHT",
"BMI",
"OBESITY",
"ABD_CIRC",
"HIP_CIRC",
"ABD_SKF",
"SUP_SKF",
"RESIST",
"REACT",
"CUFFSIZE",
"BP_SYSTOLIC",
"BP_DIASTOLIC",
"HTN",
"SMOKING_HX",
"LENGTH_SMOKING_YEARS",
"HEART_RATE",
"PHYSICAL_ACTIVITY",
"HX_DM",
"HX_STROKE",
"HX_ANXIETY",
"HX_DEPRESSION",
"SOCIAL_SUPPORT",
"PERCEIVED_CONFLICT",
"PERCEIVED_HEALTH"
],
"rows": 100,
"table": true,
"tojson": true
},
{
"name": "DS.data.D",
"title": "DS.data.D",
"object": "ExampleD",
"class": [
"data.frame"
],
"fields": [
"SUBJECT_ID",
"SAMPLE_ID",
"AGE",
"SEX",
"PREGNANT",
"HEIGHT",
"WEIGHT",
"BMI",
"OBESITY",
"ABD_CIRC",
"HIP_CIRC",
"ABD_SKF",
"SUP_SKF",
"RESIST",
"REACT",
"CUFFSIZE",
"BP_SYSTOLIC",
"BP_DIASTOLIC",
"HTN",
"SMOKING_HX",
"LENGTH_SMOKING_YEARS",
"HEART_RATE",
"PHYSICAL_ACTIVITY",
"HX_DM",
"HX_STROKE",
"HX_ANXIETY",
"HX_DEPRESSION",
"SOCIAL_SUPPORT",
"PERCEIVED_CONFLICT",
"PERCEIVED_HEALTH"
],
"rows": 100,
"table": true,
"tojson": true
},
{
"name": "DS.data.E",
"title": "DS.data.E",
"object": "ExampleE",
"class": [
"data.frame"
],
"fields": [
"SUBJECT_ID",
"SAMPLE_ID",
"AGE",
"SEX",
"HEIGHT",
"WEIGHT",
"BMI",
"OBESITY",
"ABD_CIRC",
"HIP_CIRC",
"ABD_SKF",
"SUP_SKF",
"RESIST",
"REACT",
"CUFFSIZE",
"BP_SYSTOLIC",
"BP_DIASTOLIC",
"HTN_dbGaP",
"SMOKING_HX",
"LENGTH_SMOKING_YEARS",
"HEART_RATE",
"PHYSICAL_ACTIVITY_dbGaP",
"HX_DM",
"HX_STROKE",
"HX_ANXIETY",
"HX_DEPRESSION",
"SOCIAL_SUPPORT",
"PERCEIVED_CONFLICT",
"PERCEIVED_HEALTH"
],
"rows": 100,
"table": true,
"tojson": true
},
{
"name": "DS.data.F",
"title": "DS.data.F",
"object": "ExampleF",
"class": [
"data.frame"
],
"fields": [
"SUBJECT_ID",
"SAMPLE_ID",
"AGE",
"SEX",
"PREGNANT",
"HEIGHT",
"WEIGHT",
"BMI",
"OBESITY",
"ABD_CIRC",
"HIP_CIRC",
"ABD_SKF",
"SUP_SKF",
"RESIST",
"REACT",
"CUFFSIZE",
"BP_SYSTOLIC",
"BP_DIASTOLIC",
"HTN",
"SMOKING_HX",
"LENGTH_SMOKING_YEARS",
"HEART_RATE",
"PHYSICAL_ACTIVITY",
"HX_DM",
"HX_STROKE",
"HX_ANXIETY",
"HX_DEPRESSION",
"SOCIAL_SUPPORT",
"PERCEIVED_CONFLICT",
"PERCEIVED_HEALTH"
],
"rows": 100,
"table": true,
"tojson": true
},
{
"name": "DS.data.G",
"title": "DS.data.G",
"object": "ExampleG",
"class": [
"data.frame"
],
"fields": [
"SUBJECT_ID",
"SAMPLE_ID",
"AGE",
"SEX",
"PREGNANT",
"HEIGHT",
"WEIGHT",
"BMI",
"OBESITY",
"ABD_CIRC",
"HIP_CIRC",
"ABD_SKF",
"SUP_SKF",
"RESIST",
"REACT",
"CUFFSIZE",
"BP_SYSTOLIC",
"BP_DIASTOLIC",
"HTN",
"SMOKING_HX",
"LENGTH_SMOKING_YEARS",
"HEART_RATE",
"PHYSICAL_ACTIVITY",
"HX_DM",
"HX_STROKE",
"HX_ANXIETY",
"HX_DEPRESSION",
"SOCIAL_SUPPORT",
"PERCEIVED_CONFLICT",
"PERCEIVED_HEALTH"
],
"rows": 100,
"table": true,
"tojson": true
},
{
"name": "DS.data.H",
"title": "DS.data.H",
"object": "ExampleH",
"class": [
"data.frame"
],
"fields": [
"SUBJECT_ID",
"SAMPLE_ID",
"AGE",
"SEX",
"PREGNANT",
"HEIGHT",
"WEIGHT",
"BMI",
"OBESITY",
"ABD_CIRC",
"HIP_CIRC",
"ABD_SKF",
"SUP_SKF",
"RESIST",
"REACT",
"CUFFSIZE",
"BP_SYSTOLIC",
"BP_DIASTOLIC",
"HTN",
"SMOKING_HX",
"LENGTH_SMOKING_YEARS",
"HEART_RATE",
"PHYSICAL_ACTIVITY",
"HX_DM",
"HX_STROKE",
"HX_ANXIETY",
"HX_DEPRESSION",
"SOCIAL_SUPPORT",
"PERCEIVED_CONFLICT",
"PERCEIVED_HEALTH"
],
"rows": 100,
"table": true,
"tojson": true
},
{
"name": "DS.data.I",
"title": "DS.data.I",
"object": "ExampleI",
"class": [
"data.frame"
],
"fields": [
"SUBJECT_ID",
"SAMPLE_ID",
"AGE",
"SEX",
"PREGNANT",
"HEIGHT",
"WEIGHT",
"BMI",
"OBESITY",
"ABD_CIRC",
"HIP_CIRC",
"ABD_SKF",
"SUP_SKF",
"RESIST",
"REACT",
"CUFFSIZE",
"BP_SYSTOLIC",
"BP_DIASTOLIC",
"HTN",
"SMOKING_HX",
"LENGTH_SMOKING_YEARS",
"HEART_RATE",
"PHYSICAL_ACTIVITY",
"HX_DM",
"HX_STROKE",
"HX_ANXIETY",
"HX_DEPRESSION",
"SOCIAL_SUPPORT",
"PERCEIVED_CONFLICT",
"PERCEIVED_HEALTH"
],
"rows": 100,
"table": true,
"tojson": true
},
{
"name": "DS.data.J",
"title": "DS.data.J",
"object": "ExampleJ",
"class": [
"data.frame"
],
"fields": [
"SUBJECT_ID",
"SAMPLE_ID",
"AGE",
"SEX",
"HEIGHT",
"WEIGHT",
"BMI",
"OBESITY",
"ABD_CIRC",
"HIP_CIRC",
"ABD_SKF",
"SUP_SKF",
"RESIST",
"REACT",
"CUFFSIZE",
"BP_SYSTOLIC",
"BP_DIASTOLIC",
"HTN_dbGaP",
"SMOKING_HX",
"LENGTH_SMOKING_YEARS",
"HEART_RATE",
"PHYSICAL_ACTIVITY_dbGaP",
"HX_DM",
"HX_STROKE",
"HX_ANXIETY",
"HX_DEPRESSION",
"SOCIAL_SUPPORT",
"PERCEIVED_CONFLICT",
"PERCEIVED_HEALTH"
],
"rows": 100,
"table": true,
"tojson": true
},
{
"name": "DS.data.K",
"title": "DS.data.K",
"object": "ExampleK",
"class": [
"data.frame"
],
"fields": [
"SUBJECT_ID",
"SAMPLE_ID",
"AGE",
"SEX",
"HEIGHT",
"WEIGHT",
"BMI",
"OBESITY",
"ABD_CIRC",
"HIP_CIRC",
"ABD_SKF",
"SUP_SKF",
"RESIST",
"REACT",
"CUFFSIZE",
"BP_SYSTOLIC",
"BP_DIASTOLIC",
"HTN_dbGaP",
"SMOKING_HX",
"LENGTH_SMOKING_YEARS",
"HEART_RATE",
"PHYSICAL_ACTIVITY_dbGaP",
"HX_DM",
"HX_STROKE",
"HX_ANXIETY",
"HX_DEPRESSION",
"SOCIAL_SUPPORT",
"PERCEIVED_CONFLICT",
"PERCEIVED_HEALTH"
],
"rows": 103,
"table": true,
"tojson": true
},
{
"name": "DS.data.L",
"title": "DS.data.L",
"object": "ExampleL",
"class": [
"data.frame"
],
"fields": [
"SUBJECT_ID",
"SAMPLE_ID",
"AGE",
"SEX",
"PREGNANT",
"HEIGHT",
"WEIGHT",
"BMI",
"OBESITY",
"ABD_CIRC",
"HIP_CIRC",
"ABD_SKF",
"SUP_SKF",
"RESIST",
"REACT",
"CUFFSIZE",
"BP_SYSTOLIC",
"BP_DIASTOLIC",
"HTN",
"SMOKING_HX",
"LENGTH_SMOKING_YEARS",
"HEART_RATE",
"PHYSICAL_ACTIVITY",
"HX_DM",
"HX_STROKE",
"HX_ANXIETY",
"HX_DEPRESSION",
"SOCIAL_SUPPORT",
"PERCEIVED_CONFLICT",
"PERCEIVED_HEALTH"
],
"rows": 100,
"table": true,
"tojson": true
},
{
"name": "DS.data.M",
"title": "DS.data.M",
"object": "ExampleM",
"class": [
"data.frame"
],
"fields": [
"SUBJECT_ID",
"SAMPLE_ID",
"AGE",
"SEX",
"PREGNANT",
"HEIGHT",
"WEIGHT",
"BMI",
"OBESITY",
"ABD_CIRC",
"HIP_CIRC",
"ABD_SKF",
"SUP_SKF",
"RESIST",
"REACT",
"CUFFSIZE",
"BP_SYSTOLIC",
"BP_DIASTOLIC",
"HTN",
"SMOKING_HX",
"LENGTH_SMOKING_YEARS",
"HEART_RATE",
"PHYSICAL_ACTIVITY",
"HX_DM",
"HX_STROKE",
"HX_ANXIETY",
"HX_DEPRESSION",
"SOCIAL_SUPPORT",
"PERCEIVED_CONFLICT",
"PERCEIVED_HEALTH"
],
"rows": 100,
"table": true,
"tojson": true
},
{
"name": "DS.data.N",
"title": "DS.data.N",
"object": "ExampleN",
"class": [
"data.frame"
],
"fields": [
"SUBJECT_ID",
"SAMPLE_ID",
"AGE",
"SEX",
"PREGNANT",
"HEIGHT",
"WEIGHT",
"BMI",
"OBESITY",
"ABD_CIRC",
"HIP_CIRC",
"ABD_SKF",
"SUP_SKF",
"RESIST",
"REACT",
"CUFFSIZE",
"BP_SYSTOLIC",
"BP_DIASTOLIC",
"HTN",
"SMOKING_HX",
"LENGTH_SMOKING_YEARS",
"HEART_RATE",
"PHYSICAL_ACTIVITY",
"HX_DM",
"HX_STROKE",
"HX_ANXIETY",
"HX_DEPRESSION",
"SOCIAL_SUPPORT",
"PERCEIVED_CONFLICT",
"PERCEIVED_HEALTH"
],
"rows": 100,
"table": true,
"tojson": true
},
{
"name": "DS.data.O",
"title": "DS.data.O",
"object": "ExampleO",
"class": [
"data.frame"
],
"fields": [
"ID",
"SAMPLE_ID",
"AGE",
"SEX",
"PREGNANT",
"HEIGHT",
"WEIGHT",
"BMI",
"OBESITY",
"ABD_CIRC",
"HIP_CIRC",
"ABD_SKF",
"SUP_SKF",
"RESIST",
"REACT",
"CUFFSIZE",
"BP_SYSTOLIC",
"BP_DIASTOLIC",
"HTN",
"SMOKING_HX",
"LENGTH_SMOKING_YEARS",
"HEART_RATE",
"PHYSICAL_ACTIVITY",
"HX_DM",
"HX_STROKE",
"HX_ANXIETY",
"HX_DEPRESSION",
"SOCIAL_SUPPORT",
"PERCEIVED_CONFLICT",
"PERCEIVED_HEALTH"
],
"rows": 100,
"table": true,
"tojson": true
},
{
"name": "DS.data.P",
"title": "DS.data.P",
"object": "ExampleP",
"class": [
"data.frame"
],
"fields": [
"SUBJECT_ID",
"SAMPLE_ID",
"AGE",
"SEX",
"PREGNANT",
"HEIGHT",
"WEIGHT",
"BMI",
"OBESITY",
"ABD_CIRC",
"HIP_CIRC",
"ABD_SKF",
"SUP_SKF",
"RESIST",
"REACT",
"CUFFSIZE",
"BP_SYSTOLIC",
"BP_DIASTOLIC",
"HTN",
"SMOKING_HX",
"LENGTH_SMOKING_YEARS",
"HEART_RATE",
"PHYSICAL_ACTIVITY",
"HX_DM",
"HX_STROKE",
"HX_ANXIETY",
"HX_DEPRESSION",
"SOCIAL_SUPPORT",
"PERCEIVED_CONFLICT",
"PERCEIVED_HEALTH"
],
"rows": 100,
"table": true,
"tojson": true
},
{
"name": "DS.data.Q",
"title": "DS.data.Q",
"object": "ExampleQ",
"class": [
"data.frame"
],
"fields": [
"SAMPLE_ID",
"SUBJECT_ID",
"REACT",
"AGE",
"SEX",
"PREGNANT",
"HEIGHT",
"WEIGHT",
"BMI",
"OBESITY",
"ABD_CIRC",
"HIP_CIRC",
"ABD_SKF",
"SUP_SKF",
"RESIST",
"CUFFSIZE",
"BP_SYSTOLIC",
"BP_DIASTOLIC",
"HTN",
"SMOKING_HX",
"LENGTH_SMOKING_YEARS",
"HEART_RATE",
"PHYSICAL_ACTIVITY",
"HX_DM",
"HX_STROKE",
"HX_ANXIETY",
"HX_DEPRESSION",
"SOCIAL_SUPPORT",
"PERCEIVED_CONFLICT",
"PERCEIVED_HEALTH"
],
"rows": 100,
"table": true,
"tojson": true
},
{
"name": "DS.data.R",
"title": "DS.data.R",
"object": "ExampleR",
"class": [
"data.frame"
],
"fields": [
"SUBJECT_ID",
"SAMPLE_ID",
"AGE",
"SEX",
"PREGNANT",
"HEIGHT",
"WEIGHT",
"BMI",
"OBESITY",
"ABD_CIRC",
"HIP_CIRC",
"ABD_SKF",
"SUP_SKF",
"RESIST",
"REACT",
"CUFFSIZE",
"BP_SYSTOLIC",
"BP_DIASTOLIC",
"HTN",
"SMOKING_HX",
"LENGTH_SMOKING_YEARS",
"HEART_RATE",
"PHYSICAL_ACTIVITY",
"HX_DM",
"HX_STROKE",
"HX_ANXIETY",
"HX_DEPRESSION",
"SOCIAL_SUPPORT",
"PERCEIVED_CONFLICT",
"PERCEIVED_HEALTH"
],
"rows": 100,
"table": true,
"tojson": true
},
{
"name": "DS.data.S",
"title": "DS.data.S",
"object": "ExampleS",
"class": [
"data.frame"
],
"fields": [
"SUBJECT_ID",
"SAMPLE_ID",
"REACT",
"AGE",
"SEX",
"PREGNANT",
"HEIGHT",
"WEIGHT",
"BMI",
"OBESITY",
"ABD_CIRC",
"HIP_CIRC",
"ABD_SKF",
"SUP_SKF",
"RESIST",
"CUFFSIZE",
"BP_SYSTOLIC",
"BP_DIASTOLIC",
"HTN",
"SMOKING_HX",
"LENGTH_SMOKING_YEARS",
"HEART_RATE",
"PHYSICAL_ACTIVITY",
"HX_DM",
"HX_STROKE",
"HX_ANXIETY",
"HX_DEPRESSION",
"SOCIAL_SUPPORT",
"PERCEIVED_CONFLICT",
"PERCEIVED_HEALTH"
],
"rows": 100,
"table": true,
"tojson": true
},
{
"name": "DS.data.T",
"title": "DS.data.T",
"object": "ExampleT",
"class": [
"data.frame"
],
"fields": [
"SUBJECT_ID",
"SAMPLE_ID",
"AGE",
"SEX",
"PREGNANT",
"HEIGHT",
"WEIGHT",
"BMI",
"OBESITY",
"ABD_CIRC",
"HIP_CIRC",
"ABD_SKF",
"SUP_SKF",
"RESIST",
"REACT",
"CUFFSIZE",
"BP_SYSTOLIC",
"BP_DIASTOLIC",
"HTN",
"SMOKING_HX",
"LENGTH_SMOKING_YEARS",
"HEART_RATE",
"PHYSICAL_ACTIVITY",
"HX_DM",
"HX_STROKE",
"HX_ANXIETY",
"HX_DEPRESSION",
"SOCIAL_SUPPORT",
"PERCEIVED_CONFLICT",
"PERCEIVED_HEALTH"
],
"rows": 102,
"table": true,
"tojson": true
}
],
"_help": [
{
"page": "add_missing_fields",
"title": "Add Missing Fields",
"topics": [
"add_missing_fields"
]
},
{
"page": "ascii_check",
"title": "ASCII Character Check",
"topics": [
"ascii_check"
]
},
{
"page": "ascii_cleaner",
"title": "ASCII Cleaner",
"topics": [
"ascii_cleaner"
]
},
{
"page": "check_report",
"title": "Check Report",
"topics": [
"check_report"
]
},
{
"page": "complete_check",
"title": "Complete Check",
"topics": [
"complete_check"
]
},
{
"page": "create_awareness_report",
"title": "Create Awareness Report",
"topics": [
"create_awareness_report"
]
},
{
"page": "create_report",
"title": "Create Report",
"topics": [
"create_report"
]
},
{
"page": "dat_function",
"title": "Data Utility Function",
"topics": [
"dat_function"
]
},
{
"page": "dat_function_selected",
"title": "Data Selected Utility Function",
"topics": [
"dat_function_selected"
]
},
{
"page": "DD.dict.A",
"title": "DD.dict.A",
"topics": [
"DD.dict.A"
]
},
{
"page": "DD.dict.B",
"title": "DD.dict.B",
"topics": [
"DD.dict.B"
]
},
{
"page": "DD.dict.C",
"title": "DD.dict.C",
"topics": [
"DD.dict.C"
]
},
{
"page": "DD.dict.D",
"title": "DD.dict.D",
"topics": [
"DD.dict.D"
]
},
{
"page": "DD.dict.E",
"title": "DD.dict.E",
"topics": [
"DD.dict.E"
]
},
{
"page": "DD.dict.F",
"title": "DD.dict.F",
"topics": [
"DD.dict.F"
]
},
{
"page": "DD.dict.G",
"title": "DD.dict.G",
"topics": [
"DD.dict.G"
]
},
{
"page": "DD.dict.H",
"title": "DD.dict.H",
"topics": [
"DD.dict.H"
]
},
{
"page": "DD.dict.I",
"title": "DD.dict.I",
"topics": [
"DD.dict.I"
]
},
{
"page": "DD.dict.J",
"title": "DD.dict.J",
"topics": [
"DD.dict.J"
]
},
{
"page": "DD.dict.K",
"title": "DD.dict.K",
"topics": [
"DD.dict.K"
]
},
{
"page": "DD.dict.L",
"title": "DD.dict.L",
"topics": [
"DD.dict.L"
]
},
{
"page": "DD.dict.M",
"title": "DD.dict.M",
"topics": [
"DD.dict.M"
]
},
{
"page": "DD.dict.N",
"title": "DD.dict.N",
"topics": [
"DD.dict.N"
]
},
{
"page": "DD.dict.Q",
"title": "DD.dict.Q",
"topics": [
"DD.dict.Q"
]
},
{
"page": "DD.dict.R",
"title": "DD.dict.R",
"topics": [
"DD.dict.R"
]
},
{
"page": "DD.dict.S",
"title": "DD.dict.S",
"topics": [
"DD.dict.S"
]
},
{
"page": "DD.dict.T",
"title": "DD.dict.T",
"topics": [
"DD.dict.T"
]
},
{
"page": "decimal_check",
"title": "Decimal Check",
"topics": [
"decimal_check"
]
},
{
"page": "description_check",
"title": "Description Check",
"topics": [
"description_check"
]
},
{
"page": "dictionary_search",
"title": "Data Dictionary Search",
"topics": [
"dictionary_search"
]
},
{
"page": "dimension_check",
"title": "Dimension Check",
"topics": [
"dimension_check"
]
},
{
"page": "DS.data.A",
"title": "DS.data.A",
"topics": [
"DS.data.A"
]
},
{
"page": "DS.data.B",
"title": "DS.data.B",
"topics": [
"DS.data.B"
]
},
{
"page": "DS.data.C",
"title": "DS.data.C",
"topics": [
"DS.data.C"
]
},
{
"page": "DS.data.D",
"title": "DS.data.D",
"topics": [
"DS.data.D"
]
},
{
"page": "DS.data.E",
"title": "DS.data.E",
"topics": [
"DS.data.E"
]
},
{
"page": "DS.data.F",
"title": "DS.data.F",
"topics": [
"DS.data.F"
]
},
{
"page": "DS.data.G",
"title": "DS.data.G",
"topics": [
"DS.data.G"
]
},
{
"page": "DS.data.H",
"title": "DS.data.H",
"topics": [
"DS.data.H"
]
},
{
"page": "DS.data.I",
"title": "DS.data.I",
"topics": [
"DS.data.I"
]
},
{
"page": "DS.data.J",
"title": "DS.data.J",
"topics": [
"DS.data.J"
]
},
{
"page": "DS.data.K",
"title": "DS.data.K",
"topics": [
"DS.data.K"
]
},
{
"page": "DS.data.L",
"title": "DS.data.L",
"topics": [
"DS.data.L"
]
},
{
"page": "DS.data.M",
"title": "DS.data.M",
"topics": [
"DS.data.M"
]
},
{
"page": "DS.data.N",
"title": "DS.data.N",
"topics": [
"DS.data.N"
]
},
{
"page": "DS.data.O",
"title": "DS.data.O",
"topics": [
"DS.data.O"
]
},
{
"page": "DS.data.P",
"title": "DS.data.P",
"topics": [
"DS.data.P"
]
},
{
"page": "DS.data.Q",
"title": "DS.data.Q",
"topics": [
"DS.data.Q"
]
},
{
"page": "DS.data.R",
"title": "DS.data.R",
"topics": [
"DS.data.R"
]
},
{
"page": "DS.data.S",
"title": "DS.data.S",
"topics": [
"DS.data.S"
]
},
{
"page": "DS.data.T",
"title": "DS.data.T",
"topics": [
"DS.data.T"
]
},
{
"page": "dup_values",
"title": "Duplicate Values Function",
"topics": [
"dup_values"
]
},
{
"page": "duplicated_id_check",
"title": "Duplicated ID Check",
"topics": [
"duplicated_id_check"
]
},
{
"page": "eval_function",
"title": "Evaluation Utility Function",
"topics": [
"eval_function"
]
},
{
"page": "ExampleA",
"title": "ExampleA",
"topics": [
"ExampleA"
]
},
{
"page": "ExampleB",
"title": "ExampleB",
"topics": [
"ExampleB"
]
},
{
"page": "ExampleC",
"title": "ExampleC",
"topics": [
"ExampleC"
]
},
{
"page": "ExampleD",
"title": "ExampleD",
"topics": [
"ExampleD"
]
},
{
"page": "ExampleE",
"title": "ExampleE",
"topics": [
"ExampleE"
]
},
{
"page": "ExampleF",
"title": "ExampleF",
"topics": [
"ExampleF"
]
},
{
"page": "ExampleG",
"title": "ExampleG",
"topics": [
"ExampleG"
]
},
{
"page": "ExampleH",
"title": "ExampleH",
"topics": [
"ExampleH"
]
},
{
"page": "ExampleI",
"title": "ExampleI",
"topics": [
"ExampleI"
]
},
{
"page": "ExampleJ",
"title": "ExampleJ",
"topics": [
"ExampleJ"
]
},
{
"page": "ExampleK",
"title": "ExampleK",
"topics": [
"ExampleK"
]
},
{
"page": "ExampleL",
"title": "ExampleL",
"topics": [
"ExampleL"
]
},
{
"page": "ExampleM",
"title": "ExampleM",
"topics": [
"ExampleM"
]
},
{
"page": "ExampleN",
"title": "ExampleN",
"topics": [
"ExampleN"
]
},
{
"page": "ExampleO",
"title": "ExampleO",
"topics": [
"ExampleO"
]
},
{
"page": "ExampleP",
"title": "ExampleP",
"topics": [
"ExampleP"
]
},
{
"page": "ExampleQ",
"title": "ExampleQ",
"topics": [
"ExampleQ"
]
},
{
"page": "ExampleR",
"title": "ExampleR",
"topics": [
"ExampleR"
]
},
{
"page": "ExampleS",
"title": "ExampleS",
"topics": [
"ExampleS"
]
},
{
"page": "ExampleT",
"title": "ExampleT",
"topics": [
"ExampleT"
]
},
{
"page": "field_check",
"title": "Field Check",
"topics": [
"field_check"
]
},
{
"page": "id_check",
"title": "ID Check",
"topics": [
"id_check"
]
},
{
"page": "id_first_data",
"title": "Relocate SUBJECT_ID to First Column of Data Set",
"topics": [
"id_first_data"
]
},
{
"page": "id_first_dict",
"title": "Relocate SUBJECT_ID to First Column of Data Dictionary",
"topics": [
"id_first_dict"
]
},
{
"page": "int_check",
"title": "Integer Check Base Function",
"topics": [
"int_check"
]
},
{
"page": "integer_check",
"title": "Integer Check",
"topics": [
"integer_check"
]
},
{
"page": "label_data",
"title": "Label the data",
"topics": [
"label_data"
]
},
{
"page": "minmax_check",
"title": "Minimum and Maximum Values Check",
"topics": [
"minmax_check"
]
},
{
"page": "misc_format_check",
"title": "Miscellaneous Format Check",
"topics": [
"misc_format_check"
]
},
{
"page": "missing_value_check",
"title": "Missing Value Check",
"topics": [
"missing_value_check"
]
},
{
"page": "missingness_summary",
"title": "Missingness Summary",
"topics": [
"missingness_summary"
]
},
{
"page": "mm_precheck",
"title": "Min Max Required Pre-checks",
"topics": [
"mm_precheck"
]
},
{
"page": "mv_precheck",
"title": "Missing Values Required Pre-checks",
"topics": [
"mv_precheck"
]
},
{
"page": "NA_check",
"title": "Missing Value (NA) Check",
"topics": [
"NA_check"
]
},
{
"page": "NA_precheck",
"title": "Min Max Required Pre-checks",
"topics": [
"NA_precheck"
]
},
{
"page": "name_check",
"title": "Name Check",
"topics": [
"name_check"
]
},
{
"page": "name_correct",
"title": "Name Correction Utility Function",
"topics": [
"name_correct"
]
},
{
"page": "name_precheck",
"title": "Name Pre-checks",
"topics": [
"name_precheck"
]
},
{
"page": "pkg_field_check",
"title": "Package Required Field Check",
"topics": [
"pkg_field_check"
]
},
{
"page": "reorder_data",
"title": "Reorder Data Set Utility Function",
"topics": [
"reorder_data"
]
},
{
"page": "reorder_dictionary",
"title": "Reorder Data Dictionary Utility Function",
"topics": [
"reorder_dictionary"
]
},
{
"page": "row_check",
"title": "Row Check",
"topics": [
"row_check"
]
},
{
"page": "short_field_check",
"title": "Truncated Field Check",
"topics": [
"short_field_check"
]
},
{
"page": "short_precheck",
"title": "Truncated Pre-check",
"topics": [
"short_precheck"
]
},
{
"page": "super_short_precheck",
"title": "Very Truncated Pre-check",
"topics": [
"super_short_precheck"
]
},
{
"page": "type_check",
"title": "Type Check",
"topics": [
"type_check"
]
},
{
"page": "value_meaning_table",
"title": "Value-Meaning Table",
"topics": [
"value_meaning_table"
]
},
{
"page": "value_missing_table",
"title": "Values Missing Table Awareness Function",
"topics": [
"value_missing_table"
]
},
{
"page": "values_check",
"title": "Values Check",
"topics": [
"values_check"
]
},
{
"page": "values_precheck",
"title": "Values Pre-Check",
"topics": [
"values_precheck"
]
}
],
"_readme": "https://github.com/lwheinsberg/dbgapcheckup/raw/HEAD/README.md",
"_rundeps": [
"base64enc",
"bit",
"bit64",
"bslib",
"cachem",
"cellranger",
"class",
"classInt",
"cli",
"clipr",
"commonmark",
"cpp11",
"crayon",
"digest",
"dplyr",
"e1071",
"evaluate",
"farver",
"fastmap",
"fontawesome",
"forcats",
"formatR",
"fs",
"generics",
"ggplot2",
"glue",
"gridExtra",
"gtable",
"haven",
"highr",
"hms",
"htmltools",
"httpuv",
"isoband",
"jquerylib",
"jsonlite",
"KernSmooth",
"knitr",
"labeling",
"labelled",
"later",
"lifecycle",
"magrittr",
"MASS",
"memoise",
"mime",
"miniUI",
"naniar",
"norm",
"otel",
"pander",
"pillar",
"pkgconfig",
"plyr",
"prettyunits",
"progress",
"promises",
"proxy",
"purrr",
"questionr",
"R.cache",
"R.methodsS3",
"R.oo",
"R.utils",
"R6",
"rappdirs",
"RColorBrewer",
"Rcpp",
"readr",
"readxl",
"rematch",
"rlang",
"rmarkdown",
"rprojroot",
"rstudioapi",
"S7",
"sass",
"scales",
"shiny",
"sourcetools",
"stringi",
"stringr",
"styler",
"tibble",
"tidyr",
"tidyselect",
"tinytex",
"tzdb",
"UpSetR",
"utf8",
"vctrs",
"viridis",
"viridisLite",
"visdat",
"vroom",
"withr",
"xfun",
"xtable",
"yaml"
],
"_vignettes": [
{
"source": "dbGaPCheckup.Rmd",
"filename": "dbGaPCheckup.html",
"title": "dbGaPCheckup Quick Start",
"author": "Lacey W. Heinsberg and Daniel E. Weeks",
"engine": "knitr::rmarkdown",
"headings": [
"Copyright information",
"Installation",
"Quick start",
"Usage",
"Example usage",
"Load the dbGaPCheckup R package",
"Read in your Subject Phenotype data into DS.data.",
"Read in your Subject Phenotype data dictionary into DD.dict.",
"Run the function check_report.",
"If needed, run the function add_missing_fields and repeat check_report",
"Reporting",
"Labelled data",
"Contact information",
"Acknowledgments"
],
"created": "2022-10-31 19:23:06",
"modified": "2025-05-01 14:12:00",
"commits": 10
},
{
"source": "dbGaPCheckup_vignette.Rmd",
"filename": "dbGaPCheckup_vignette.html",
"title": "dbGaPCheckup Vignette",
"author": "Lacey W. Heinsberg and Daniel E. Weeks",
"engine": "knitr::rmarkdown",
"headings": [
"Copyright information",
"Overview",
"Installation",
"Data format, file types, and file names",
"Files",
"Subject Phenotype Data Set (DS)",
"Subject Phenotype Data Dictionary (DD)",
"Execution with example runs and interpretation",
"Check, utility, and awareness functions",
"Example 1",
"Example 2",
"Example 3",
"Example 4",
"Example 5",
"Example 6",
"Reporting functions",
"Label data function",
"Appendix: Reporting functions",
"Appendix A: Awareness Report",
"Missingness Summary",
"Values Missing Tables",
"Check A: If the user defines a missing value code that is not present in the data (In Set M and Not in Set D).",
"Check B: If a VALUES entry defines an encoded code value, but that value is not present in the data (In Set V and Not in Set D).",
"Check C: If the user defines a missing value code that is not defined in a VALUES entry (In Set M and Not in Set V).",
"Check D: If a user-defined missing value code is present in the data for a given variable, but that variable does not have a corresponding VALUES entry (M in Set D and Not in Set V).",
"Check E: If a VALUES entry is NOT defined as a missing value code AND is NOT identified in the data. ((Set V values that are NOT in Set M) that are NOT in Set D).",
"Appendix B: Data Report",
"Summary and plots",
"Contact information",
"Acknowledgments"
],
"created": "2022-10-31 19:23:06",
"modified": "2025-05-01 14:12:00",
"commits": 15
}
],
"_score": 4.924279286061882,
"_indexed": true,
"_nocasepkg": "dbgapcheckup",
"_universes": [
"lwheinsberg"
],
"_binaries": [
{
"r": "4.7.0",
"os": "linux",
"version": "1.2.0",
"date": "2026-05-26T09:42:45.000Z",
"distro": "noble",
"commit": "984c24fef8c46df121e5df2ca761f6b845fa167b",
"fileid": "0451c9ac539004079ef5bd8fcb38e09e4a6adfd2bcf1bbcf25b1ac5ee8dc84da",
"status": "success",
"check": "OK",
"buildurl": "https://github.com/r-universe/lwheinsberg/actions/runs/26444464913"
},
{
"r": "4.6.0",
"os": "linux",
"version": "1.2.0",
"date": "2026-05-26T09:43:10.000Z",
"distro": "noble",
"commit": "984c24fef8c46df121e5df2ca761f6b845fa167b",
"fileid": "8353a45f74654a6c345380d7e7dafe5b1b55eeb2b2bc642a808780488d70dc9e",
"status": "success",
"check": "OK",
"buildurl": "https://github.com/r-universe/lwheinsberg/actions/runs/26444464913"
},
{
"r": "4.5.3",
"os": "mac",
"version": "1.2.0",
"date": "2026-05-26T09:42:28.000Z",
"commit": "984c24fef8c46df121e5df2ca761f6b845fa167b",
"fileid": "3d37495b26660da1ff5849fc13d551ca2e85cddf31f445b898996bb548493a24",
"status": "success",
"check": "OK",
"buildurl": "https://github.com/r-universe/lwheinsberg/actions/runs/26444464913"
},
{
"r": "4.6.0",
"os": "mac",
"version": "1.2.0",
"date": "2026-05-26T09:42:16.000Z",
"commit": "984c24fef8c46df121e5df2ca761f6b845fa167b",
"fileid": "234f3d28bd61273c9ba1c73f3e043cbd6bb3daf0e95f9933f602af3ac7c642a8",
"status": "success",
"check": "OK",
"buildurl": "https://github.com/r-universe/lwheinsberg/actions/runs/26444464913"
},
{
"r": "4.6.0",
"os": "wasm",
"version": "1.2.0",
"date": "2026-05-26T09:42:58.000Z",
"commit": "984c24fef8c46df121e5df2ca761f6b845fa167b",
"fileid": "317a4976850d37771f10c4efaf15b83cd4f6cad8b1eeaf2b92810214efe50a4d",
"status": "success",
"buildurl": "https://github.com/r-universe/lwheinsberg/actions/runs/26444464913"
},
{
"r": "4.7.0",
"os": "win",
"version": "1.2.0",
"date": "2026-05-26T09:41:52.000Z",
"commit": "984c24fef8c46df121e5df2ca761f6b845fa167b",
"fileid": "26e8ffdf7ad48862bcca7a280b5b53f398bb777e5ede58a2d7772ba7c82eccbd",
"status": "success",
"check": "OK",
"buildurl": "https://github.com/r-universe/lwheinsberg/actions/runs/26444464913"
},
{
"r": "4.5.3",
"os": "win",
"version": "1.2.0",
"date": "2026-05-26T09:41:54.000Z",
"commit": "984c24fef8c46df121e5df2ca761f6b845fa167b",
"fileid": "8a8dbb828c9d29284c20213554ff82df8580a1a5135ef9a706a65675ffb03c01",
"status": "success",
"check": "OK",
"buildurl": "https://github.com/r-universe/lwheinsberg/actions/runs/26444464913"
},
{
"r": "4.6.0",
"os": "win",
"version": "1.2.0",
"date": "2026-05-26T09:41:44.000Z",
"commit": "984c24fef8c46df121e5df2ca761f6b845fa167b",
"fileid": "6a1b2af9e5bd9901f118649a1282c34e1a0ecdf10cb4d88ad2a7f4eb857db416",
"status": "success",
"check": "OK",
"buildurl": "https://github.com/r-universe/lwheinsberg/actions/runs/26444464913"
}
]
}